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1

Identification and Characterization of Sex-Associated Loci in Sockeye Salmon Using Genotyping-by-Sequencing and Comparison with a Sex-Determining Assay Based on the sdY Gene

Larson, Wesley A., McKinney, Garrett J., Seeb, James E., Seeb, Lisa W.

Journal:

Journal of Heredity

Year:

2016

Language:

english

File:

PDF, 474 KB

english, 2016

2

Transforming ecology and conservation biology through genome editing

Phelps, Michael P., Seeb, Lisa W., Seeb, James E.

Journal:

Conservation Biology

Year:

2019

Language:

english

File:

PDF, 1.32 MB

english, 2019

3

Divergent life-history races do not represent Chinook salmon coast-wide: the importance of scale in Quaternary biogeography

Moran, Paul, Teel, David J., Banks, Michael A., Beacham, Terry D., Bellinger, M. Renee, Blankenship, Scott M., Candy, John R., Garza, John Carlos, Hess, Jon E., Narum, Shawn R., Seeb, Lisa W., Templin

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

2013

File:

PDF, 2.21 MB

2013

4

Single Nucleotide Polymorphisms Provide Rapid and Accurate Estimates of the Proportions of U.S. and Canadian Chinook Salmon Caught in Yukon River Fisheries

Smith, Christian T., Templin, William D., Seeb, James E., Seeb, Lisa W.

Journal:

North American Journal of Fisheries Management

Year:

2005

Language:

english

File:

PDF, 122 KB

english, 2005

5

A General Model for Salmon Run Reconstruction That Accounts for Interception and Differences in Availability to Harvest

Cunningham, Curry J., Branch, Trevor A., Dann, Tyler H., Smith, Matt, Seeb, James E, Seeb, Lisa W., Hilborn, Ray

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

2017

Language:

english

File:

PDF, 2.00 MB

english, 2017

6

Hierarchical biogeographical processes largely explain the genomic divergence pattern in a species complex of sea anemones (Metridioidea: Sagartiidae: Anthothoe )

Spano, Carlos A., Häussermann, Vreni, Acuña, Fabián H., Griffiths, Charles, Seeb, Lisa W., Gomez-Uchida, Daniel

Journal:

Molecular Phylogenetics and Evolution

Year:

2018

Language:

english

File:

PDF, 25.16 MB

english, 2018

7

Single nucleotide polymorphisms unravel hierarchical divergence and signatures of selection among Alaskan sockeye salmon (Oncorhynchus nerka) populations

Daniel Gomez-Uchida, James E Seeb, Matt J Smith, Christopher Habicht, Thomas P Quinn, Lisa W Seeb

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 2.02 MB

english, 2011

8

Allozyme polymorphisms permit the identification of larval and juvenile rockfishes of the genusSebastes

Lisa W. Seeb, Arthur W. Kendall

Journal:

Environmental Biology of Fishes

Year:

1991

Language:

english

File:

PDF, 1.12 MB

english, 1991

9

The genetic variability of the red king crab,Paralithodes camtschatica(Tilesius, 1815) (Anomura, Lithodidae) introduced into the Barents Sea compared with samples from the Bering Sea and Kamchatka region using eleven microsatellite loci

Knut E. Jørstad, Christian Smith, Zac Grauvogel, Lisa Seeb

Journal:

Year:

2007

Language:

english

File:

PDF, 194 KB

english, 2007

10

Use of sequence data from rainbow trout and Atlantic salmon for SNP detection in Pacific salmon

CHRISTIAN T. SMITH, CARITA M. ELFSTROM, LISA W. SEEB, JAMES E. SEEB

Journal:

Molecular Ecology

Year:

2005

Language:

english

File:

PDF, 167 KB

english, 2005

11

Thirty-eight single nucleotide polymorphism markers for high-throughput genotyping of chum salmon

CARITA M. ELFSTROM, CHRISTIAN T. SMITH, LISA W. SEEB

Journal:

Molecular Ecology Resources

Year:

2007

Language:

english

File:

PDF, 83 KB

english, 2007

12

Migration of Pacific Rim Chum Salmon on the High Seas: Insights from Genetic Data

Lisa W. Seeb, Penelope A. Crane, Christine M. Kondzela, Richard L. Wilmot, Shigehiko Urawa, Natalya V. Varnavskaya, James E. Seeb

Journal:

Environmental Biology of Fishes

Year:

2004

Language:

english

File:

PDF, 236 KB

english, 2004

13

Genetic Population Structure of Chum Salmon in the Pacific Rim Inferred from Mitochondrial DNA Sequence Variation

Shunpei Sato, Hiroyuki Kojima, Junko Ando, Hironori Ando, Richard L. Wilmot, Lisa W. Seeb, Vladimir Efremov, Larry LeClair, Wally Buchholz, Deuk-Hee Jin, Shigehiko Urawa, Masahide Kaeriyama, Akihisa U

Journal:

Environmental Biology of Fishes

Year:

2004

Language:

english

File:

PDF, 131 KB

english, 2004

14

Genetic Variation and Postglacial Dispersal of Populations of Northern Pike (Esox lucius) in North America

Seeb, James E., Seeb, Lisa W., Oates, David W., Utter, Fred M.

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

1987

Language:

english

File:

PDF, 461 KB

english, 1987

15

Signatures of natural selection among lineages and habitats in Oncorhynchus mykiss

Morten T. Limborg, Scott M. Blankenship, Sewall F. Young, Fred M. Utter, Lisa W. Seeb, Mette H. H. Hansen, James E. Seeb

Journal:

Ecology and Evolution

Year:

2012

Language:

english

File:

PDF, 1.25 MB

english, 2012

16

Temporal and Geographic Genetic Divergence: Characterizing Sockeye Salmon Populations in the Chignik Watershed, Alaska, Using Single-Nucleotide Polymorphisms

Creelman, Elisabeth K., Hauser, Lorenz, Simmons, Ryan K., Templin, William D., Seeb, Lisa W.

Journal:

Transactions of the American Fisheries Society

Year:

2011

Language:

english

File:

PDF, 389 KB

english, 2011

17

Genetic and Ecological Divergence Defines Population Structure of Sockeye Salmon Populations Returning to Bristol Bay, Alaska, and Provides a Tool for Admixture Analysis

Habicht, Christopher, Seeb, Lisa W., Seeb, James E.

Journal:

Transactions of the American Fisheries Society

Year:

2007

Language:

english

File:

PDF, 333 KB

english, 2007

18

Genetic implications of broodstock selection for crayfish aquaculture in the Midwestern United States

James W. Fetzner Jr., Robert J. Sheehan, Lisa W. Seeb

Journal:

Year:

1997

Language:

english

File:

PDF, 1.04 MB

english, 1997

19

Managing fisheries using genetic data: case studies from four species of Pacific salmon

James B Shaklee, Terry D Beacham, Lisa Seeb, Bruce A White

Journal:

Fisheries Research

Year:

1999

Language:

english

File:

PDF, 939 KB

english, 1999

20

An empirical comparison of SNPs and microsatellites for parentage and kinship assignment in a wild sockeye salmon (Oncorhynchus nerka) population

LORENZ HAUSER, MELISSA BAIRD, RAY HILBORN, LISA W. SEEB, JAMES E. SEEB

Journal:

Molecular Ecology Resources

Year:

2011

Language:

english

File:

PDF, 274 KB

english, 2011

21

Multiplex preamplification PCR and microsatellite validation enables accurate single nucleotide polymorphism genotyping of historical fish scales

MATT J. SMITH, CARITA E. PASCAL, ZAC GRAUVOGEL, CHRISTOPHER HABICHT, JAMES E. SEEB, LISA W. SEEB

Journal:

Molecular Ecology Resources

Year:

2011

Language:

english

File:

PDF, 349 KB

english, 2011

22

Genetic differentiation of Alaska Chinook salmon: the missing link for migratory studies

WILLIAM D. TEMPLIN, JAMES E. SEEB, JAMES R. JASPER, ANDREW W. BARCLAY, LISA W. SEEB

Journal:

Molecular Ecology Resources

Year:

2011

Language:

english

File:

PDF, 4.91 MB

english, 2011

23

Complementary uses of ecological and biochemical genetic data in identifying and conserving salmon populations

Fred M. Utter, James E. Seeb, Lisa W. Seeb

Journal:

Fisheries Research

Year:

1993

Language:

english

File:

PDF, 1.13 MB

english, 1993

24

Allozymes and Mitochondrial DNA Discriminate Asian and North American Populations of Chum Salmon in Mixed-Stock Fisheries along the South Coast of the Alaska Peninsula

Seeb, Lisa W., Crane, Penelope A.

Journal:

Transactions of the American Fisheries Society

Year:

1999

Language:

english

File:

PDF, 150 KB

english, 1999

25

Genetic Relationships Among Salvelinus Species Inferred from Allozyme Data

Crane, Penelope A., Seeb, Lisa W., Seeb, James E.

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

1994

Language:

english

File:

PDF, 1.63 MB

english, 1994

26

Single-Nucleotide Polymorphisms (SNPs) under Diversifying Selection Provide Increased Accuracy and Precision in Mixed-Stock Analyses of Sockeye Salmon from the Copper River, Alaska

Ackerman, Michael W., Habicht, Christopher, Seeb, Lisa W.

Journal:

Transactions of the American Fisheries Society

Year:

2011

Language:

english

File:

PDF, 536 KB

english, 2011

27

[Developments in environmental biology of fishes] Genetics of Subpolar Fish and Invertebrates Volume 23 ||

Gharrett, Anthony J., Gustafson, Richard G., Nielsen, Jennifer L., Seeb, James E., Seeb, Lisa W., Smoker, William W., Thorgaard, Gary H., Wilmot, Richard L.

Year:

2004

Language:

english

File:

PDF, 6.94 MB

english, 2004

28

Genetic Interpretation of Broad-Scale Microsatellite Polymorphism in Odd-Year Pink Salmon

Olsen, Jeffrey B., Seeb, Lisa W., Bentzen, Paul, Seeb, James E.

Journal:

Transactions of the American Fisheries Society

Year:

1998

Language:

english

File:

PDF, 168 KB

english, 1998

29

High-Resolution Melting Analysis for the Discovery of Novel Single-Nucleotide Polymorphisms in Rainbow and Cutthroat Trout for Species Identification

McGlauflin, Molly T., Smith, Matt J., Wang, Jonathan T., Young, Sewall F., Chen, Neng, Lee, Yong C., Pascal, Carita, Seeb, Lisa W., Stevens, Junko, Seeb, James E.

Journal:

Transactions of the American Fisheries Society

Year:

2010

Language:

english

File:

PDF, 606 KB

english, 2010

30

Deep sequencing of the transcriptome and mining of single nucleotide polymorphisms (SNPs) provide genomic resources for applied studies in Chinook salmon (Oncorhynchus tshawytscha)

Gomez-Uchida, Daniel, Seeb, Lisa W., Warheit, Kenneth I., McKinney, Garrett J., Seeb, James E.

Journal:

Conservation Genetics Resources

Year:

2014

Language:

english

File:

PDF, 213 KB

english, 2014

31

Conservation of Fish and Shellfish Resources: Managing Diversity.by J. E. Thorpe; G. A. E. Gall; J. E. Lannan; C. E. Nash

Review by: Lisa W. Seeb

Journal:

Quarterly Review of Biology

Year:

1998

Language:

english

File:

PDF, 82 KB

english, 1998

32

Low Genic Variation between Black Ducks and Mallards

C. Davison Ankney, Darrell G. Dennis, Lisa N. Wishard and James E. Seeb

Journal:

Year:

1986

Language:

english

File:

PDF, 306 KB

english, 1986

33

Single-nucleotide polymorphisms (SNPs) identified through genotyping-by-sequencing improve genetic stock identification of Chinook salmon ( Oncorhynchus tshawytscha ) from western Alaska

Larson, Wesley A., Seeb, James E., Pascal, Carita E., Templin, William D., Seeb, Lisa W., Taylor, Eric

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

2014

File:

PDF, 1003 KB

2014

34

Signals of heterogeneous selection at an MHC locus in geographically proximate ecotypes of sockeye salmon

Larson, Wesley A., Seeb, James E., Dann, Tyler H., Schindler, Daniel E., Seeb, Lisa W.

Journal:

Molecular Ecology

Year:

2014

Language:

english

File:

PDF, 511 KB

english, 2014

35

Use of the 5′-Nuclease Reaction for Single Nucleotide Polymorphism Genotyping in Chinook Salmon

Smith, Christian T., Seeb, James E., Schwenke, Piper, Seeb, Lisa W.

Journal:

Transactions of the American Fisheries Society

Year:

2005

Language:

english

File:

PDF, 154 KB

english, 2005

36

Allele frequency stability in large, wild exploited populations over multiple generations: insights from Alaska sockeye salmon ( Oncorhynchus nerka )

Gomez-Uchida, Daniel, Seeb, James E., Habicht, Christopher, Seeb, Lisa W., Taylor, Eric

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

2012

File:

PDF, 430 KB

2012

37

DNA and allozyme markers provide concordant estimates of population differentiation: analyses of U.S. and Canadian populations of Yukon River fall-run chum salmon ( Oncorhynchus keta )

Scribner, Kim T, Crane, Penelope A, Spearman, William J, Seeb, Lisa W

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

1998

File:

PDF, 193 KB

1998

38

Genetic variation in allozymes of western larch

Fins, Lauren, Seeb, Lisa W.

Journal:

Canadian Journal of Forest Research

Year:

1986

File:

PDF, 136 KB

1986

39

Spawning Habitat and Geography Influence Population Structure and Juvenile Migration Timing of Sockeye Salmon in the Wood River Lakes, Alaska

McGlauflin, Molly T., Schindler, Daniel E., Seeb, Lisa W., Smith, Christian T., Habicht, Christopher, Seeb, James E.

Journal:

Transactions of the American Fisheries Society

Year:

2011

Language:

english

File:

PDF, 728 KB

english, 2011

40

Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon ( Oncorhynchus tshawytscha )

Larson, Wesley A., Seeb, Lisa W., Everett, Meredith V., Waples, Ryan K., Templin, William D., Seeb, James E.

Journal:

Evolutionary Applications

Year:

2014

Language:

english

File:

PDF, 463 KB

english, 2014

41

Hatchery Reform in Washington State

Mobrand, Lars E., Barr, John, Blankenship, Lee, Campton, Donald E., Evelyn, Trevor T. P., Flagg, Tom A., Mahnken, Conrad V. W., Seeb, Lisa W., Seidel, Paul R., Smoker, William W.

Journal:

Year:

2005

Language:

english

File:

PDF, 689 KB

english, 2005

42

Summer emigration and resource acquisition within a shared nursery lake by sockeye salmon ( Oncorhynchus nerka ) from historically discrete rearing environments

Simmons, Ryan K., Quinn, Thomas P., Seeb, Lisa W., Schindler, Daniel E., Hilborn, Ray, Taylor, Eric

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

2013

File:

PDF, 559 KB

2013

43

Impacts of Marker Class Bias Relative to Locus-Specific Variability on Population Inferences in Chinook Salmon: A Comparison of Single-Nucleotide Polymorphisms with Short Tandem Repeats and Allozymes

Smith, Christian T., Antonovich, Anton, Templin, William D., Elfstrom, Carita M., Narum, Shawn R., Seeb, Lisa W.

Journal:

Transactions of the American Fisheries Society

Year:

2007

Language:

english

File:

PDF, 211 KB

english, 2007

44

Genetic Structure and Diversity of Japanese Chum Salmon Populations Inferred from Single-Nucleotide Polymorphism Markers

Sato, Shunpei, Templin, William D., Seeb, Lisa W., Seeb, James E., Urawa, Shigehiko

Journal:

Transactions of the American Fisheries Society

Year:

2014

Language:

english

File:

PDF, 594 KB

english, 2014

45

Single-Nucleotide Polymorphic Genotypes Reveal Patterns of Early Juvenile Migration of Sockeye Salmon in the Eastern Bering Sea

Seeb, Lisa W., Seeb, James E., Habicht, Christopher, Farley, Edward V., Utter, Fred M.

Journal:

Transactions of the American Fisheries Society

Year:

2011

Language:

english

File:

PDF, 906 KB

english, 2011

46

Number of Alleles as a Predictor of the Relative Assignment Accuracy of Short Tandem Repeat (STR) and Single-Nucleotide-Polymorphism (SNP) Baselines for Chum Salmon

Smith, Christian T., Seeb, Lisa W.

Journal:

Transactions of the American Fisheries Society

Year:

2008

Language:

english

File:

PDF, 246 KB

english, 2008

47

Single-nucleotide polymorphisms reveal distribution and migration of Chinook salmon ( Oncorhynchus tshawytscha ) in the Bering Sea and North Pacific Ocean

Larson, Wesley A., Utter, Fred M., Myers, Katherine W., Templin, William D., Seeb, James E., Guthrie III, Charles M., Bugaev, Alexander V., Seeb, Lisa W., Moran, Paloma

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

2013

Language:

english

File:

PDF, 1.58 MB

english, 2013

48

Genetic Variation and Population Structure of Pacific Ocean Perch ( Sebastes alutus )

Seeb, Lisa Wishard, Gunderson, Donald R.

Journal:

Canadian Journal of Fisheries and Aquatic Sciences

Year:

1988

Language:

english

File:

PDF, 1.16 MB

english, 1988

49

[Developments in environmental biology of fishes] Genetics of Subpolar Fish and Invertebrates Volume 23 || Using haplotype trees for phylogeographic and species inference in fish populations

Gharrett, Anthony J., Gustafson, Richard G., Nielsen, Jennifer L., Seeb, James E., Seeb, Lisa W., Smoker, William W., Thorgaard, Gary H., Wilmot, Richard L.

Year:

2004

Language:

english

File:

PDF, 250 KB

english, 2004

50

High Genetic Heterogeneity in Chum Salmon in Western Alaska, the Contact Zone between Northern and Southern Lineages

Seeb, Lisa W., Crane, Penelope A.

Journal:

Transactions of the American Fisheries Society

Year:

1999

Language:

english

File:

PDF, 957 KB

english, 1999